STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
istB2IstB2: IstB-like ATP-binding protein, transposase IS21 family. (249 aa)    
Predicted Functional Partners:
CCK79662.1
Integrase.
     0.929
istA3-2
Integrase catalytic region.
  
 0.788
istA3
IstA3: transposase for insertion sequence element IS21.
  
 0.788
dnaB
DnaB: replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins. Belongs to the helicase family. DnaB subfamily.
  
 
 0.757
CCK79588.1
Integrase, catalytic region.
     0.700
CCK80024.1
Integrase catalytic region.
     0.700
CCK80526.1
Integrase.
     0.700
CCK80790.1
Integrase, catalytic region.
     0.700
CCK81194.1
Integrase, catalytic region.
     0.700
CCK79661.1
Predicted transposase, IS116/IS110/IS902 family protein.
       0.485
Your Current Organism:
Desulfobacula toluolica
NCBI taxonomy Id: 651182
Other names: D. toluolica Tol2, Desulfobacula toluolica DSM 7467, Desulfobacula toluolica Tol2, Desulfobacula toluolica str. Tol2, Desulfobacula toluolica strain Tol2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.