Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
aspCAspC: predicted aspartate aminotransferase. (390 aa)    
Predicted Functional Partners:
pheA
PheA: P-protein (includes: chorismate mutase and prephenate dehydratase).
 
 
 0.960
tyrA
TyrA: T-protein [includes: chorismate mutase; prephenate dehydrogenase].
  
 
 0.929
argG
ArgG: argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily.
  
 0.922
mdh
Mdh: malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 3 family.
  
 0.921
mdh2
Mdh2: malate dehydrogenase; Belongs to the LDH/MDH superfamily.
  
 0.921
CCK78931.1
Uncharacterized aminotransferase.
 
  
 
0.917
CCK81388.1
Predicted glutamate synthase, large subunit; Belongs to the glutamate synthase family.
  
 
 0.917
CCK78414.1
Putative aminotransferase.
 
  
0.915
CCK81124.1
Glutamate synthase beta chain-related oxidoreductase.
  
 
 0.913
purA
PurA: adenylosuccinate lyase, subunit A; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family.
  
 0.913
Your Current Organism:
Desulfobacula toluolica
NCBI taxonomy Id: 651182
Other names: D. toluolica Tol2, Desulfobacula toluolica DSM 7467, Desulfobacula toluolica Tol2, Desulfobacula toluolica str. Tol2, Desulfobacula toluolica strain Tol2
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