Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CCK79685.1Conserved uncharacterized protein. (263 aa)    
Predicted Functional Partners:
CCK78337.1
Uncharacterized protein.
  
     0.735
CCK79810.1
Conserved uncharacterized protein.
  
     0.728
CCK79968.1
Glycosyltransferase, family I.
 
     0.681
CCK79967.1
Methyltransferase, type 11.
  
     0.642
CCK82447.1
Hydrolase, NUDIX family.
  
   
 0.641
fadB
FadB: 3-hydroxyacyl-CoA dehydrogenase, NAD-binding.
  
 
 0.543
CCK79682.1
Conserved uncharacterized protein.
       0.497
CCK79683.1
Xanthine and CO dehydrogenase maturation factor.
       0.497
CCK79684.1
Conserved uncharacterized protein, CHP03172.
       0.497
CCK79884.1
RbsV: anti-sigma-B factor antagonist; Signal peptide; Belongs to the anti-sigma-factor antagonist family.
  
     0.461
Your Current Organism:
Desulfobacula toluolica
NCBI taxonomy Id: 651182
Other names: D. toluolica Tol2, Desulfobacula toluolica DSM 7467, Desulfobacula toluolica Tol2, Desulfobacula toluolica str. Tol2, Desulfobacula toluolica strain Tol2
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