Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
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[Homology]
Score
CCK79696.1Predicted outer membrane autotransporter barrel protein. (2897 aa)    
Predicted Functional Partners:
CCK82113.1
TonB-dependent receptor; Signal peptide.
 
 
 
 0.587
CCK81464.1
TonB-dependent receptor, fragment.
  
 
 
 0.553
CCK82341.1
TonB-dependent receptor; Signal peptide.
  
 
 
 0.552
CCK81467.1
TonB-dependent receptor, related to iron transport; Signal peptide.
  
 
 
 0.530
infB
InfB: translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily.
    
 
 0.511
tolA
TolA: putative TonB family protein.
  
 
 
 0.505
CCK78220.1
TonB-dependent receptor.
    
 
 0.465
CCK78388.1
Putative TonB-dependent receptor; Signal peptide.
    
 
 0.465
CCK80833.1
TonB-dependent receptor.
    
 
 0.465
CCK81454.1
TonB-dependent receptor, related to iron transport.
    
 
 0.465
Your Current Organism:
Desulfobacula toluolica
NCBI taxonomy Id: 651182
Other names: D. toluolica Tol2, Desulfobacula toluolica DSM 7467, Desulfobacula toluolica Tol2, Desulfobacula toluolica str. Tol2, Desulfobacula toluolica strain Tol2
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