STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCK79703.1Radical SAM domain protein. (316 aa)    
Predicted Functional Partners:
obg
Obg: GTP-binding protein, involved in ribosome maturation; An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family.
 
 
    0.760
CCK79945.1
Predicted dinitrogenase iron-molybdenum cofactor biosynthesis protein.
 
     0.545
pcm
Pcm: protein-L-isoaspartate O-methyltransferase (protein-beta-aspartate methyltransferase); Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and/or degradation of damaged proteins.
   
    0.527
cbiA3
CbiA3: predicted cobyrinic acid a,c-diamide synthase.
 
     0.516
CCK79702.1
Predicted nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase.
       0.492
cbiA4
CbiA4: predicted cobyrinic acid a,c-diamide synthase.
 
     0.483
CCK81329.1
Beta-lactamase domain protein.
 
     0.443
CCK80952.1
Conserved uncharacterized protein.
  
     0.431
CCK79875.1
Predicted dinitrogenase iron-molybdenum cofactor biosynthesis protein.
 
     0.429
CCK80455.1
Uncharacterized solute-binding protein; Signal peptide.
 
     0.427
Your Current Organism:
Desulfobacula toluolica
NCBI taxonomy Id: 651182
Other names: D. toluolica Tol2, Desulfobacula toluolica DSM 7467, Desulfobacula toluolica Tol2, Desulfobacula toluolica str. Tol2, Desulfobacula toluolica strain Tol2
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