Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CCK79719.1Two component system response regulator, sigma54-specific. (468 aa)    
Predicted Functional Partners:
CCK79720.1
Two component system sensor histidine kinase; Signal peptide.
 
 
 0.897
CCK79721.1
Transcriptional regulator, IclR family.
     
 0.718
rpoN
RpoN: RNA polymerase sigma54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.
 
   
 0.623
CCK79670.1
Two component system sensor histidine kinase.
 
 
 0.485
CCK81773.1
Two component system sensor histidine kinase.
 
 
 0.483
zraS2
ZraS2: two component system sensor histidine kinase; Signal peptide.
 
 
 0.457
fliM
FliM: flagellar motor switch protein.
  
  
 0.439
bssA3
BssA3: benzylsuccinate synthase, alpha subunit.
       0.426
fliP
FliP: flagellar biosynthesis protein, protein export component; Plays a role in the flagellum-specific transport system. Belongs to the FliP/MopC/SpaP family.
  
  
 0.423
zraS
ZraS: two component system sensor histidine kinase, related to zraS; Signal peptide.
 
 
 0.418
Your Current Organism:
Desulfobacula toluolica
NCBI taxonomy Id: 651182
Other names: D. toluolica Tol2, Desulfobacula toluolica DSM 7467, Desulfobacula toluolica Tol2, Desulfobacula toluolica str. Tol2, Desulfobacula toluolica strain Tol2
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