STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCK79719.1Two component system response regulator, sigma54-specific. (468 aa)    
Predicted Functional Partners:
CCK79720.1
Two component system sensor histidine kinase; Signal peptide.
 
 
 0.905
CCK79721.1
Transcriptional regulator, IclR family.
     
 0.719
rpoN
RpoN: RNA polymerase sigma54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.
 
   
 0.623
CCK79139.1
MCP methyltransferase/methylesterase, CheR/CheB-like with PAS/PAC sensor domain.
  
 
 0.555
CCK81773.1
Two component system sensor histidine kinase.
 
 
 0.535
CCK79670.1
Two component system sensor histidine kinase.
 
 
 0.497
cheA2
CheA2: chemotaxis protein A, histidine kinase.
  
 
 0.480
zraS
ZraS: two component system sensor histidine kinase, related to zraS; Signal peptide.
 
 
 0.477
zraS2
ZraS2: two component system sensor histidine kinase; Signal peptide.
 
 
 0.469
CCK78262.1
Putative ParA family protein.
  
 
 0.451
Your Current Organism:
Desulfobacula toluolica
NCBI taxonomy Id: 651182
Other names: D. toluolica Tol2, Desulfobacula toluolica DSM 7467, Desulfobacula toluolica Tol2, Desulfobacula toluolica str. Tol2, Desulfobacula toluolica strain Tol2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.