Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CCK79771.1Conserved uncharacterized protein. (132 aa)    
Predicted Functional Partners:
CCK79772.1
Conserved uncharacterized protein.
 
   0.996
CCK79773.1
Putative sensory protein; Signal peptide.
 
    0.960
CCK82252.1
Diguanylate cyclase (GGDEF) domain protein.
  
   0.873
CCK79770.1
Diguanylate cyclase (GGDEF) domain protein.
       0.773
hcrA2
HcrA2: predicted 4-hydroxybenzoyl-CoA reductase, alpha subunit.
       0.527
hcrC2
HcrC2: predicted 4-hydroxybenzoyl-CoA reductase, gamma subunit.
       0.527
hcrB2
HcrB2: predicted 4-hydroxybenzoyl-CoA reductase, beta subunit.
       0.527
CCK81346.1
Predicted EAL/GGDEF domain signaling protein.
 
   0.502
CCK81236.1
Diguanylate cyclase (GGDEF) domain protein.
 
   0.500
CCK81957.1
Two component system response regulator, modulated diguanylate cyclase.
  
   0.452
Your Current Organism:
Desulfobacula toluolica
NCBI taxonomy Id: 651182
Other names: D. toluolica Tol2, Desulfobacula toluolica DSM 7467, Desulfobacula toluolica Tol2, Desulfobacula toluolica str. Tol2, Desulfobacula toluolica strain Tol2
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