Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CCK79811.1 | CCK79812.1 | TOL2_C16490 | TOL2_C16500 | Conserved uncharacterized protein, DUF558; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit. | Uncharacterized protein. | 0.512 |
CCK79811.1 | nadC | TOL2_C16490 | TOL2_C16520 | Conserved uncharacterized protein, DUF558; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit. | NadC: nicotinate-nucleotide pyrophosphorylase (carboxylating); Belongs to the NadC/ModD family. | 0.401 |
CCK79811.1 | valS | TOL2_C16490 | TOL2_C16510 | Conserved uncharacterized protein, DUF558; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit. | ValS: valyl-tRNA synthetase; Catalyzes the attachment of valine to tRNA(Val). As ValRS can inadvertently accommodate and process structurally similar amino acids such as threonine, to avoid such errors, it has a 'posttransfer' editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA- dependent manner; Belongs to the class-I aminoacyl-tRNA synthetase family. ValS type 1 subfamily. | 0.413 |
CCK79812.1 | CCK79811.1 | TOL2_C16500 | TOL2_C16490 | Uncharacterized protein. | Conserved uncharacterized protein, DUF558; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit. | 0.512 |
CCK79812.1 | nadC | TOL2_C16500 | TOL2_C16520 | Uncharacterized protein. | NadC: nicotinate-nucleotide pyrophosphorylase (carboxylating); Belongs to the NadC/ModD family. | 0.539 |
CCK79812.1 | valS | TOL2_C16500 | TOL2_C16510 | Uncharacterized protein. | ValS: valyl-tRNA synthetase; Catalyzes the attachment of valine to tRNA(Val). As ValRS can inadvertently accommodate and process structurally similar amino acids such as threonine, to avoid such errors, it has a 'posttransfer' editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA- dependent manner; Belongs to the class-I aminoacyl-tRNA synthetase family. ValS type 1 subfamily. | 0.539 |
nadC | CCK79811.1 | TOL2_C16520 | TOL2_C16490 | NadC: nicotinate-nucleotide pyrophosphorylase (carboxylating); Belongs to the NadC/ModD family. | Conserved uncharacterized protein, DUF558; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit. | 0.401 |
nadC | CCK79812.1 | TOL2_C16520 | TOL2_C16500 | NadC: nicotinate-nucleotide pyrophosphorylase (carboxylating); Belongs to the NadC/ModD family. | Uncharacterized protein. | 0.539 |
nadC | valS | TOL2_C16520 | TOL2_C16510 | NadC: nicotinate-nucleotide pyrophosphorylase (carboxylating); Belongs to the NadC/ModD family. | ValS: valyl-tRNA synthetase; Catalyzes the attachment of valine to tRNA(Val). As ValRS can inadvertently accommodate and process structurally similar amino acids such as threonine, to avoid such errors, it has a 'posttransfer' editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA- dependent manner; Belongs to the class-I aminoacyl-tRNA synthetase family. ValS type 1 subfamily. | 0.828 |
valS | CCK79811.1 | TOL2_C16510 | TOL2_C16490 | ValS: valyl-tRNA synthetase; Catalyzes the attachment of valine to tRNA(Val). As ValRS can inadvertently accommodate and process structurally similar amino acids such as threonine, to avoid such errors, it has a 'posttransfer' editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA- dependent manner; Belongs to the class-I aminoacyl-tRNA synthetase family. ValS type 1 subfamily. | Conserved uncharacterized protein, DUF558; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit. | 0.413 |
valS | CCK79812.1 | TOL2_C16510 | TOL2_C16500 | ValS: valyl-tRNA synthetase; Catalyzes the attachment of valine to tRNA(Val). As ValRS can inadvertently accommodate and process structurally similar amino acids such as threonine, to avoid such errors, it has a 'posttransfer' editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA- dependent manner; Belongs to the class-I aminoacyl-tRNA synthetase family. ValS type 1 subfamily. | Uncharacterized protein. | 0.539 |
valS | nadC | TOL2_C16510 | TOL2_C16520 | ValS: valyl-tRNA synthetase; Catalyzes the attachment of valine to tRNA(Val). As ValRS can inadvertently accommodate and process structurally similar amino acids such as threonine, to avoid such errors, it has a 'posttransfer' editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA- dependent manner; Belongs to the class-I aminoacyl-tRNA synthetase family. ValS type 1 subfamily. | NadC: nicotinate-nucleotide pyrophosphorylase (carboxylating); Belongs to the NadC/ModD family. | 0.828 |