Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CCK79837.1Conserved uncharacterized protein. (421 aa)    
Predicted Functional Partners:
CCK79838.1
Predicted uncharacterized ATP-dependent helicase.
 
 
   0.894
CCK79841.1
Uncharacterized protein.
 
 
   0.873
CCK79842.1
Putative DNA replication ATP-dependent helicase.
 
     0.849
CCK79836.1
Conserved uncharacterized protein.
 
    
0.735
CCK78289.1
Putative transposase, IS4-family.
  
     0.722
CCK80838.1
Predicted transposase, IS4 family.
  
     0.706
polA
PolA: DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
  
  
 0.696
CCK78265.1
Transposase, IS4 family protein.
  
     0.632
CCK78580.1
Transposase, IS4 family protein.
  
     0.631
CCK79007.1
Transposase, IS4 family.
  
     0.631
Your Current Organism:
Desulfobacula toluolica
NCBI taxonomy Id: 651182
Other names: D. toluolica Tol2, Desulfobacula toluolica DSM 7467, Desulfobacula toluolica Tol2, Desulfobacula toluolica str. Tol2, Desulfobacula toluolica strain Tol2
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