STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCK79838.1Predicted uncharacterized ATP-dependent helicase. (426 aa)    
Predicted Functional Partners:
CCK79841.1
Uncharacterized protein.
     0.988
CCK79842.1
Putative DNA replication ATP-dependent helicase.
     0.983
CCK79839.1
Uncharacterized protein.
      0.958
CCK79840.1
Uncharacterized protein.
      0.953
CCK79837.1
Conserved uncharacterized protein.
 
 
   0.904
CCK79836.1
Conserved uncharacterized protein.
 
     0.862
rhlB
RhlB: ATP-dependent RNA helicase; DEAD-box RNA helicase involved in RNA degradation. Has RNA- dependent ATPase activity and unwinds double-stranded RNA.
 
   
 0.681
CCK78289.1
Putative transposase, IS4-family.
  
     0.501
CCK80838.1
Predicted transposase, IS4 family.
  
     0.501
CCK82006.1
Fumarate reductase/succinate dehydrogenase flavoprotein domain protein.
  
     0.417
Your Current Organism:
Desulfobacula toluolica
NCBI taxonomy Id: 651182
Other names: D. toluolica Tol2, Desulfobacula toluolica DSM 7467, Desulfobacula toluolica Tol2, Desulfobacula toluolica str. Tol2, Desulfobacula toluolica strain Tol2
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.