STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCK79888.1NAD-dependent epimerase/dehydratase. (305 aa)    
Predicted Functional Partners:
CCK78201.1
Conserved uncharacterized protein related to NAD-dependent epimerase/dehydratase.
    0.635
minE
MinE: cell division topolofgical specificity factor; Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell.
   
  
 0.603
CCK79887.1
Putative sensor histidine kinase.
  
    0.530
blc2
Blc2: outer membrane transporter, lipocalin family; Involved in the storage or transport of lipids necessary for membrane maintenance under stressful conditions. Displays a binding preference for lysophospholipids.
      0.522
CCK79886.1
Histidine triad (HIT) family protein.
       0.518
zupT
ZupT: zinc transporter; Signal peptide.
  
    0.487
rbr4
Rbr4: rubrerythrin.
       0.469
CCK81440.1
Predicted iron-dependent repressor, DtxR family.
   
    0.441
CCK80354.1
Predicted signal peptidase I; Belongs to the peptidase S26 family.
   
    0.420
rpoN
RpoN: RNA polymerase sigma54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.
   
    0.414
Your Current Organism:
Desulfobacula toluolica
NCBI taxonomy Id: 651182
Other names: D. toluolica Tol2, Desulfobacula toluolica DSM 7467, Desulfobacula toluolica Tol2, Desulfobacula toluolica str. Tol2, Desulfobacula toluolica strain Tol2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.