Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CCK79909.1Transcriptional regulator, PAS domain linked with LysR-type HTH domain. (292 aa)    
Predicted Functional Partners:
CCK80058.1
Two component system sensor histidine kinase.
 
 
 0.904
CCK79625.1
Two component system sensor histidine kinase, hybrid.
  
 
 0.863
CCK82273.1
Two component system sensor histidine kinase, hybrid.
 
 
 0.858
CCK78441.1
Response regulator protein.
 
 
 0.739
CCK81079.1
Two component system sensor histidine kinase, hybrid.
 
 
 0.732
CCK78503.1
Response regulator; His kinase domain; ATPase domain.
 
 
 0.731
CCK79907.1
Conserved uncharacterized protein; Signal peptide.
       0.727
CCK79908.1
Phosphoesterase RecJ domain protein.
       0.727
CCK79628.1
Two component system sensor histidine kinase, hybrid, associated with CheB and CheR.
 
 
 0.726
CCK78832.1
Two component system sensor kinase, hybrid.
 
 
 0.724
Your Current Organism:
Desulfobacula toluolica
NCBI taxonomy Id: 651182
Other names: D. toluolica Tol2, Desulfobacula toluolica DSM 7467, Desulfobacula toluolica Tol2, Desulfobacula toluolica str. Tol2, Desulfobacula toluolica strain Tol2
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