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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
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[Homology]
Score
paaKPaaK: putative phenylacetate-CoA ligase (aerobic). (440 aa)    
Predicted Functional Partners:
padJ
PadJ: phenylacetate-CoA ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA).
  
  
 
0.918
CCK80000.1
ACT domain protein.
 
   0.762
gapN
GapN: NADP-dependent glycerinaldehyde-3-phsophate dehydrogenase.
  
 
 0.740
CCK78881.1
Amino acid-binding ACT domain protein.
 
   0.707
CCK81829.1
Amino acid adenylation domain protein.
  
  
 0.572
CCK81789.1
Predicted polyketide synthase.
  
  
 0.548
pfaA
PfaA: polyketide-type polyunsaturated fatty acid synthase.
  
  
 0.541
CCK81774.1
Sodium/solute symporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
 
     0.501
oah
Oah: predicted 6-oxo-cyclohex-1-ene-carbonyl-CoA hydrolase; Belongs to the enoyl-CoA hydratase/isomerase family.
 
   
 0.483
dctP8
DctP8: predicted TRAP dicarboxylate transporter periplasmic binding protein; Signal peptide.
       0.475
Your Current Organism:
Desulfobacula toluolica
NCBI taxonomy Id: 651182
Other names: D. toluolica Tol2, Desulfobacula toluolica DSM 7467, Desulfobacula toluolica Tol2, Desulfobacula toluolica str. Tol2, Desulfobacula toluolica strain Tol2
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