Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
hdlA4HdlA4: heterodisulfide reductase-like protein, iron-sulfur subunit. (1142 aa)    
Predicted Functional Partners:
CCK81396.1
Predicted glutamate synthase, alpha subunit, C-terminal region.
 
 
 0.992
CCK81389.1
Predicted glutamate synthase, small subunit.
 
 
0.932
bamH1
BamH1: NADH-quinone oxidoreductase, subunit F.
 
 
 0.927
bamH3
BamH3: NADH-quinone oxidoreductase, subunit F.
 
 
 0.927
mvhD4
MvhD4: methyl-viologen-reducing hydrogenase, delta subunit.
 
 0.895
CCK81047.1
NADH-quinone oxidoreductase, subunit F, N-terminal Fragment.
 
 
 0.895
bamH2
BamH2: NADH-quinone oxidoreductase, subunit F.
 
 
 0.893
CCK81842.1
Oxidotreductase FAD/NAD(P)-binding domain protein.
 
 0.889
CCK78433.1
Predicted CoB--CoM heterodisulfide reductase, subunit B.
 
 
 0.856
hdlB
HdlB: heterodisulfide reductase-like protein, subunit B.
 
 
 0.842
Your Current Organism:
Desulfobacula toluolica
NCBI taxonomy Id: 651182
Other names: D. toluolica Tol2, Desulfobacula toluolica DSM 7467, Desulfobacula toluolica Tol2, Desulfobacula toluolica str. Tol2, Desulfobacula toluolica strain Tol2
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