Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CCK79973.1Conserved uncharacterized protein, related to methyltransferase. (217 aa)    
Predicted Functional Partners:
CCK82484.1
Conserved uncharacterized protein.
   
   0.751
pccB
PccB: propionyl-CoA carboxylase, beta subunit.
 
    
 0.602
pfaA
PfaA: polyketide-type polyunsaturated fatty acid synthase.
  
 
 0.571
CCK81829.1
Amino acid adenylation domain protein.
  
 
 0.565
ubiB
UbiB: predicted ubiquinone biosyntesis protein.
   
 
 0.529
CCK81789.1
Predicted polyketide synthase.
  
 
 0.514
eno
Eno: enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family.
  
  
 0.462
Your Current Organism:
Desulfobacula toluolica
NCBI taxonomy Id: 651182
Other names: D. toluolica Tol2, Desulfobacula toluolica DSM 7467, Desulfobacula toluolica Tol2, Desulfobacula toluolica str. Tol2, Desulfobacula toluolica strain Tol2
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