Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
CCK80044.1TRP-repeat-containing protein with CheY-like response regulator receiver domain. (338 aa)    
Predicted Functional Partners:
CCK80043.1
Uncharacterized protein related to adenylate cyclase.
 
     0.795
CCK79042.1
Two component system sensor histidine kinase, barA-like.
  
 
 0.780
CCK81748.1
Tetratricopeptide repeat protein.
 
 
 
 0.776
CCK78447.1
Sensory box histidine kinase/response regulator protein.
  
 
 0.768
CCK81781.1
Helicase domain protein.
  
 
 0.751
CCK78832.1
Two component system sensor kinase, hybrid.
  
 
 0.744
CCK81418.1
Two component system sensor histidine kinase, hybrid; Signal peptide.
  
 
 0.742
CCK82273.1
Two component system sensor histidine kinase, hybrid.
  
 
 0.734
CCK81738.1
Conserved uncharacterized protein, associated with flagellar apparatus genes; Signal peptide.
 
  
 0.733
flgK
FlgK: putative flagellar hook-associated protein 1; Belongs to the flagella basal body rod proteins family.
 
   0.713
Your Current Organism:
Desulfobacula toluolica
NCBI taxonomy Id: 651182
Other names: D. toluolica Tol2, Desulfobacula toluolica DSM 7467, Desulfobacula toluolica Tol2, Desulfobacula toluolica str. Tol2, Desulfobacula toluolica strain Tol2
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