STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tmcBTmcB: predicted Tmc redox complex, cytoplasmic iron-sulfur protein. (445 aa)    
Predicted Functional Partners:
tmcA
TmcA: predicetd Tmc redox complex, acidic cyctchrome c, class III family protein; Signal peptide.
 
  
 0.947
tmcC
TmcC: predicted Tmc redox complex, uncharacterized membrane protein; Signal anchor.
 
 
 0.922
CCK80072.1
Response regulator protein.
 
    0.825
CCK82374.1
Conserved uncharacterized protein; Signal anchor.
 
 
 0.797
hmcE
HmcE: HMC redox complex, integral membrane protein; Signal peptide.
 
 
 0.796
CCK80073.1
Universal stress protein family protein.
 
    0.791
dsrA
DsrA: sulfite reductase, dissimilatory-type, subunit alpha.
 
  
 0.736
dsrB
DsrB: sulfite reductase, dissimilatory-type, beta subunit.
 
  
 0.728
dsrM
DsrM: predicted redox complex linked to DsrAB, transmembrane subunit; Signal peptide.
 
 
 0.725
dsrC
DsrC: sulfite reductase, dissimilatory-type, gamma subunit.
 
 
 
 0.709
Your Current Organism:
Desulfobacula toluolica
NCBI taxonomy Id: 651182
Other names: D. toluolica Tol2, Desulfobacula toluolica DSM 7467, Desulfobacula toluolica Tol2, Desulfobacula toluolica str. Tol2, Desulfobacula toluolica strain Tol2
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