Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
speE2SpeE2: spermidine synthase (putrescine aminopropyltransferase); Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy-AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine. (288 aa)    
Predicted Functional Partners:
speH
SpeH: S-adenosylmethionine decarboxylase proenzyme; Catalyzes the decarboxylation of S-adenosylmethionine to S- adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine; Belongs to the prokaryotic AdoMetDC family. Type 1 subfamily.
 
 0.999
speB
SpeB: agmatinase (Agmatine ureohydrolase); Belongs to the arginase family.
  
 
 0.951
speE
SpeE: predicted spermidine synthase; Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy-AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine.
 
  
 
0.937
CCK78369.1
Putative nitrilase.
  
 
 0.931
mtnP
MtnP: S-methyl-5'-thioadenosine phosphorylase (5'-methylthioadenosine phosphorylase); Purine nucleoside phosphorylase involved in purine salvage.
 
 
 0.931
mtaD
MtaD: 5-methylthioadenosine/S-adenosylhomocysteine deaminase.
   
 0.912
CCK79992.1
Conserved uncharacterized protein, DUF152; Belongs to the multicopper oxidase YfiH/RL5 family.
    
  0.902
CCK80077.1
Predicted acetyltransferase, GNAT family.
      0.825
fliM
FliM: flagellar motor switch protein.
   
   0.803
CCK78492.1
Uncharacterized protein related to S-adenosylmethionine decarboxylase.
  
  
 0.707
Your Current Organism:
Desulfobacula toluolica
NCBI taxonomy Id: 651182
Other names: D. toluolica Tol2, Desulfobacula toluolica DSM 7467, Desulfobacula toluolica Tol2, Desulfobacula toluolica str. Tol2, Desulfobacula toluolica strain Tol2
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