Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
Experiments
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[Homology]
Score
CCK80121.1Predicted beta-lactamase. (360 aa)    
Predicted Functional Partners:
CCK81302.1
Conserved uncharacterized protein, DUF1343.
  
 0.986
nagZ
NagZ: beta-N-acetylhexosaminidase.
  
 0.978
mrdA
MrdA: penicillin-binding protein 2.
    
 0.956
dacC
DacC: predicted peptidase S13, D-Ala-D-Ala carboxypeptidase C.
 
  
 0.934
CCK80120.1
Peptidase, S66 family, LD-carboxypeptidase A.
 
   
 0.925
pbpB
PbpB: penicillin-binding protein 1B; Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross- linking of the peptide subunits).
   
 
 0.920
penA
PenA: penicillin-binding protein 2.
     
 0.919
pbpA3
PbpA3: penicillin-binding protein 1A.
     
 0.913
pbpA
PbpA: penicillin-binding protein 1A; Signal peptide.
     
 0.910
pbpA2
PbpA2: penicillin-binding protein 1A.
     
 0.910
Your Current Organism:
Desulfobacula toluolica
NCBI taxonomy Id: 651182
Other names: D. toluolica Tol2, Desulfobacula toluolica DSM 7467, Desulfobacula toluolica Tol2, Desulfobacula toluolica str. Tol2, Desulfobacula toluolica strain Tol2
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