Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CCK80197.1Predicted integrase; Belongs to the 'phage' integrase family. (291 aa)    
Predicted Functional Partners:
CCK80196.1
Transposase, IS801/IS1294 family.
 
     0.874
CCK78373.1
Putative tyrosine recombinase (Fragment).
  
     0.773
CCK80034.1
Integrase family protein; Belongs to the 'phage' integrase family.
  
   
 0.688
CCK79427.1
Putative integrase.
  
     0.590
CCK81564.1
Integrase family protein; Belongs to the 'phage' integrase family.
  
     0.582
CCK80182.1
Transposase, IS801/IS1294 family.
 
     0.476
CCK80191.1
Transposase, IS801/IS1294 family.
 
     0.476
CCK80248.1
Transposase, IS801/IS1294 family.
 
     0.476
CCK81243.1
Transposase, IS801/IS1294 family.
 
     0.476
CCK80779.1
Transposase, IS801/IS1294 family.
 
     0.475
Your Current Organism:
Desulfobacula toluolica
NCBI taxonomy Id: 651182
Other names: D. toluolica Tol2, Desulfobacula toluolica DSM 7467, Desulfobacula toluolica Tol2, Desulfobacula toluolica str. Tol2, Desulfobacula toluolica strain Tol2
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