Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CCK80214.1HicB family protein. (111 aa)    
Predicted Functional Partners:
CCK80213.1
YcfA family protein.
       0.791
CCK79837.1
Conserved uncharacterized protein.
  
     0.607
CCK79841.1
Uncharacterized protein.
  
     0.584
CCK79836.1
Conserved uncharacterized protein.
  
     0.544
CCK80674.1
Predicted antitoxin, related to RelB.
  
   
 0.491
CCK80211.1
Transposase, IS801/IS1294 family.
       0.469
CCK80212.1
Predicted integrase.
       0.469
CCK81041.1
HesB-like protein.
  
     0.464
Your Current Organism:
Desulfobacula toluolica
NCBI taxonomy Id: 651182
Other names: D. toluolica Tol2, Desulfobacula toluolica DSM 7467, Desulfobacula toluolica Tol2, Desulfobacula toluolica str. Tol2, Desulfobacula toluolica strain Tol2
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