Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CCK80226.1Transposase, IS4 family. (535 aa)    
Predicted Functional Partners:
CCK80596.1
Predicted methyl-accepting chemotyis protein.
  
     0.621
CCK79091.1
SAM-dependent methyltransferase.
  
     0.566
CCK80227.1
Conserved uncharacterized protein.
       0.561
CCK80228.1
Transposase, IS66 family Orf2.
       0.561
CCK79117.1
Conserved uncharacterized protein.
  
     0.504
CCK81458.1
Conserved uncharacterized protein; Signal peptide.
  
     0.472
CCK80229.1
Transposase, IS66 family.
       0.462
CCK79763.1
Metal-dependent phosphohydrolase.
  
     0.431
CCK78376.1
Predicted universal stress protein.
  
     0.412
CCK81474.1
Predicted methyltransferase, type 12.
  
     0.411
Your Current Organism:
Desulfobacula toluolica
NCBI taxonomy Id: 651182
Other names: D. toluolica Tol2, Desulfobacula toluolica DSM 7467, Desulfobacula toluolica Tol2, Desulfobacula toluolica str. Tol2, Desulfobacula toluolica strain Tol2
Server load: medium (50%) [HD]