Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CCK80281.1Conserved uncharacterized protein, UPF0301; Belongs to the UPF0301 (AlgH) family. (176 aa)    
Predicted Functional Partners:
CCK80280.1
Conserved uncharacterized protein.
 
 
 
 0.821
dnaN
DnaN: DNA polymerase III, beta chain; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiatio [...]
   
 
 0.656
CCK79837.1
Conserved uncharacterized protein.
  
  
 0.590
CCK78394.1
Putative thymidylate synthase.
   
  
 0.582
mltB
MltB: membrane-bound lytic murein transglycosylase B-like protein; Signal peptide.
  
     0.567
CCK80282.1
Uncharacterized protein.
       0.537
CCK79139.1
MCP methyltransferase/methylesterase, CheR/CheB-like with PAS/PAC sensor domain.
  
   0.490
CCK80705.1
Putative band 7 protein.
  
    0.485
CCK79144.1
Putative inner membrane protein, band 7 family; Signal peptide.
   
    0.459
CCK79145.1
Putative inner membrane protein, band 7 family; Signal anchor.
   
    0.459
Your Current Organism:
Desulfobacula toluolica
NCBI taxonomy Id: 651182
Other names: D. toluolica Tol2, Desulfobacula toluolica DSM 7467, Desulfobacula toluolica Tol2, Desulfobacula toluolica str. Tol2, Desulfobacula toluolica strain Tol2
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