Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
rfbDRfbD: UDP-galactopyranose mutase. (366 aa)    
Predicted Functional Partners:
capF
CapF: capsular polysaccharide synthesis enzyme.
  
  
 0.955
galE
GalE: UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
    
 0.928
CCK78989.1
NAD-dependent epimerase/dehydratase.
 
  
 0.925
CCK81677.1
Predicted UDP-glucose 4-epimerase.
 
  
 0.920
CCK81686.1
dTDP-glucose 4,6-hedydratase.
 
  
 0.911
CCK80310.1
NAD-dependent epimerase/dehydratase.
    
 0.909
CCK80493.1
UDP-glucose dehydrogenase domain protein.
  
  
 0.864
algD
AlgD: GDP-mannose 6-dehydrogenase.
  
  
 0.864
CCK80301.1
Predicted glycosyl transferase, family 2.
 
  
 0.817
CCK78336.1
Transferase hexapeptide repeat containing protein.
  
    0.801
Your Current Organism:
Desulfobacula toluolica
NCBI taxonomy Id: 651182
Other names: D. toluolica Tol2, Desulfobacula toluolica DSM 7467, Desulfobacula toluolica Tol2, Desulfobacula toluolica str. Tol2, Desulfobacula toluolica strain Tol2
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