Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
CCK80314.1Predicted O-antigen export system, permease protein; Signal anchor. (187 aa)    
Predicted Functional Partners:
CCK80307.1
Predicted O-antigen export system ATP-binding protein.
 
 0.997
CCK79574.1
ABC transporter, ATP-binding protein, putative function in lipopolysaccharide export.
 
 0.995
CCK80308.1
Predicted O-antigen export system, permease protein.
 
  
 
0.963
CCK79572.1
Putative ABC transporter (type 2), peramease protein, putative function in lipopolysaccharide export.
  
  
 
0.926
CCK80301.1
Predicted glycosyl transferase, family 2.
 
  
 0.768
CCK80313.1
Predicted D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
     
 0.729
CCK79575.1
Predicted methyltransferase, type 11.
 
   
 0.693
CCK80310.1
NAD-dependent epimerase/dehydratase.
  
  
 0.683
CCK80306.1
Uncharacterized protein, related to glycosyltransferase family 2.
  
  
 0.658
CCK80311.1
2-dehydro-3-deoxyglucarate aldolase; Belongs to the HpcH/HpaI aldolase family.
  
    0.655
Your Current Organism:
Desulfobacula toluolica
NCBI taxonomy Id: 651182
Other names: D. toluolica Tol2, Desulfobacula toluolica DSM 7467, Desulfobacula toluolica Tol2, Desulfobacula toluolica str. Tol2, Desulfobacula toluolica strain Tol2
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