STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCK80380.1Putative purine nucleoside phosphorylase. (255 aa)    
Predicted Functional Partners:
CCK80381.1
Conserved uncharacterized protein.
       0.785
ligA
LigA: DNA ligase; DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double- stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA.
       0.784
glyS
GlyS: glycyl-tRNA synthetase, beta subunit.
       0.574
glyQ
GlyQ: glycyl-tRNA synthetase, alpha subunit.
       0.574
recO
RecO: DNA repair protein; Involved in DNA repair and RecF pathway recombination.
       0.519
CCK80384.1
GHMP kinase.
       0.512
mgtE
MgtE: magnesium transporter; Acts as a magnesium transporter.
       0.495
surA
SurA: predicted chaperone (peptidyl-prolyl cis-trans isomerase); Signal peptide.
       0.451
CCK80388.1
Conserved uncharacterized protein; Signal peptide.
       0.441
CCK79179.1
Predicted exoribonlease II.
  
     0.421
Your Current Organism:
Desulfobacula toluolica
NCBI taxonomy Id: 651182
Other names: D. toluolica Tol2, Desulfobacula toluolica DSM 7467, Desulfobacula toluolica Tol2, Desulfobacula toluolica str. Tol2, Desulfobacula toluolica strain Tol2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.