Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CCK80388.1Conserved uncharacterized protein; Signal peptide. (251 aa)    
Predicted Functional Partners:
surA
SurA: predicted chaperone (peptidyl-prolyl cis-trans isomerase); Signal peptide.
       0.826
recO
RecO: DNA repair protein; Involved in DNA repair and RecF pathway recombination.
     
 0.726
mgtE
MgtE: magnesium transporter; Acts as a magnesium transporter.
   
   0.700
CCK80384.1
GHMP kinase.
       0.691
glyQ
GlyQ: glycyl-tRNA synthetase, alpha subunit.
  
  
 0.658
glyS
GlyS: glycyl-tRNA synthetase, beta subunit.
  
    0.627
rpoB
RpoB: DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
  
 
 0.468
CCK80381.1
Conserved uncharacterized protein.
       0.452
ligA
LigA: DNA ligase; DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double- stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA.
       0.446
CCK80380.1
Putative purine nucleoside phosphorylase.
       0.440
Your Current Organism:
Desulfobacula toluolica
NCBI taxonomy Id: 651182
Other names: D. toluolica Tol2, Desulfobacula toluolica DSM 7467, Desulfobacula toluolica Tol2, Desulfobacula toluolica str. Tol2, Desulfobacula toluolica strain Tol2
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