Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
CCK80408.1Radical SAM protein. (503 aa)    
Predicted Functional Partners:
cinA
CinA: competence-induced protein; Belongs to the CinA family.
       0.757
CCK80752.1
Cobalamin-binding, radical SAM protein.
  
     0.561
CCK82195.1
Transcriptional regulator, LuxR family.
  
     0.506
CCK80574.1
Conserved uncharacterized protein.
  
     0.494
CCK81886.1
Import inner membrane translocase, subunit Tim44.
 
     0.493
CCK80409.1
Predicted ATP-dependent RNA helicase.
       0.476
CCK80410.1
Uncharacterized protein.
       0.476
CCK81998.1
Radical SAM domain protein.
  
     0.458
CCK81071.1
Conserved uncharacterized protein.
  
    0.437
CCK80993.1
Conserved uncharacterized protein.
  
     0.429
Your Current Organism:
Desulfobacula toluolica
NCBI taxonomy Id: 651182
Other names: D. toluolica Tol2, Desulfobacula toluolica DSM 7467, Desulfobacula toluolica Tol2, Desulfobacula toluolica str. Tol2, Desulfobacula toluolica strain Tol2
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