STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCK80417.1Putative peptidoglycan-binding protein, related to LysM. (250 aa)    
Predicted Functional Partners:
cyaA2
Cya: adenylate cyclase.
 
 
 
 0.716
mdtG
MdtG: predicted multidrug resistance protein.
  
   
 0.623
CCK80399.1
Outer membrane protein, related to OmpA/MotB.
   
 
 0.578
ompA
OmpA: outer membrane protein; Signal peptide.
 
 
 
 0.569
CCK79141.1
Predicted outer membrane protein, OmpA/MotB domain; Signal peptide.
 
 
 
 0.564
CCK78791.1
Pentapeptide repeat family protein.
   
 
 0.561
CCK79137.1
Predicted ABC-type transport system, periplasmic binding protein; Signal peptide.
 
     0.544
CCK82502.1
Uncharacterized protein, associated with cobalamin biosynthesis gene cluster.
  
     0.535
CCK78424.1
Uncharacterized protein.
  
     0.532
CCK81748.1
Tetratricopeptide repeat protein.
 
     0.529
Your Current Organism:
Desulfobacula toluolica
NCBI taxonomy Id: 651182
Other names: D. toluolica Tol2, Desulfobacula toluolica DSM 7467, Desulfobacula toluolica Tol2, Desulfobacula toluolica str. Tol2, Desulfobacula toluolica strain Tol2
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