Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CCK80424.1Conserved uncharacterized protein; Signal peptide. (169 aa)    
Predicted Functional Partners:
ostA
OstA: organic solvent tolerance protein; Involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane; Belongs to the LptD family.
 
 
 
 0.968
leuS
LeuS: leucyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
  
 0.938
yaeT
YaeT: outer membrane protein assembly complex protein.
  
 
 
 0.815
bamD
Putative DNA uptake lipoprotein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.
   
 
 0.807
yaeT2
YaeT2: outer membrane protein assembly complex protein.
  
 
 
 0.805
CCK79216.1
Conserved uncharacterized protein.
  
     0.741
CCK80280.1
Conserved uncharacterized protein.
  
     0.693
CCK80325.1
Predicted UDP-N-acetylglucosamine pyrophosphorylase.
  
   
 0.671
CCK81907.1
Zinc finger/thioredoxin domain protein.
  
     0.663
CCK79994.1
Conserved uncharacterized protein; Signal anchor.
  
     0.656
Your Current Organism:
Desulfobacula toluolica
NCBI taxonomy Id: 651182
Other names: D. toluolica Tol2, Desulfobacula toluolica DSM 7467, Desulfobacula toluolica Tol2, Desulfobacula toluolica str. Tol2, Desulfobacula toluolica strain Tol2
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