STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CCK80427.1Tetratricopeptide repeat protein. (290 aa)    
Predicted Functional Partners:
CCK80426.1
Tetratricopeptide repeat protein; Signal peptide.
 
    
0.851
CCK80436.1
Type II and III secretion system protein; Signal peptide; Belongs to the bacterial secretin family.
 
 
 0.821
CCK79243.1
Tetratricopeptide repeat protein.
 
 
 0.798
CCK81831.1
Tetratricopeptide repeat protein.
 
 
 0.795
cpaB
CpaB: Flp pilus assembly protein; Signal peptide.
 
  
 0.754
CCK80428.1
Predicted type II secretion system protein; Signal peptide.
 
  
 0.753
CCK80429.1
Type II secretion system protein.
 
  
 0.748
CCK80431.1
Putative response regulator protein.
 
  
 0.725
CCK80014.1
Tetratricopeptide (TRP1+2) repeat protein; Signal peptide.
 
 
 0.723
CCK80433.1
TadE family protein; Signal anchor.
 
  
 0.662
Your Current Organism:
Desulfobacula toluolica
NCBI taxonomy Id: 651182
Other names: D. toluolica Tol2, Desulfobacula toluolica DSM 7467, Desulfobacula toluolica Tol2, Desulfobacula toluolica str. Tol2, Desulfobacula toluolica strain Tol2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.