Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CCK80436.1Type II and III secretion system protein; Signal peptide; Belongs to the bacterial secretin family. (459 aa)    
Predicted Functional Partners:
cpaB
CpaB: Flp pilus assembly protein; Signal peptide.
 
 
 0.999
CCK80431.1
Putative response regulator protein.
 
 
 0.997
CCK80429.1
Type II secretion system protein.
 
 
 0.995
CCK80430.1
Type II secretion system protein E.
 
 0.995
CCK80428.1
Predicted type II secretion system protein; Signal peptide.
 
 
 0.994
CCK81598.1
Type II secretion system protein E.
 
 0.991
CCK80434.1
Putative TadE family protein; Signal peptide.
 
  
 0.943
CCK80433.1
TadE family protein; Signal anchor.
 
  
 0.927
cpaA
CpaA: Flp pilus assembly protein, protease; Signal anchor.
 
   
 0.919
CCK80432.1
Uncharacterized protein.
 
     0.870
Your Current Organism:
Desulfobacula toluolica
NCBI taxonomy Id: 651182
Other names: D. toluolica Tol2, Desulfobacula toluolica DSM 7467, Desulfobacula toluolica Tol2, Desulfobacula toluolica str. Tol2, Desulfobacula toluolica strain Tol2
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