STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCK80483.1Conserved uncharacterized protein, related to acyl carrier protein. (78 aa)    
Predicted Functional Partners:
CCK81829.1
Amino acid adenylation domain protein.
  
 
 0.974
CCK81789.1
Predicted polyketide synthase.
  
 
 0.962
bamH1
BamH1: NADH-quinone oxidoreductase, subunit F.
  
 0.959
bamH3
BamH3: NADH-quinone oxidoreductase, subunit F.
  
 0.959
rplU
RplU: 50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.
  
 
 0.874
CCK80482.1
acyl-CoA ligase (AMP-foming), exosortase system type 1 associated.
  
 
 0.871
pfaA
PfaA: polyketide-type polyunsaturated fatty acid synthase.
  
 
 0.858
CCK78201.1
Conserved uncharacterized protein related to NAD-dependent epimerase/dehydratase.
   
 0.854
algI
AlgI: predicted poly(beta-D-mannuronate) O-acetylase; Belongs to the membrane-bound acyltransferase family.
  
 
 0.848
rplQ
RplQ: 50S ribosomal protein L17.
   
   0.829
Your Current Organism:
Desulfobacula toluolica
NCBI taxonomy Id: 651182
Other names: D. toluolica Tol2, Desulfobacula toluolica DSM 7467, Desulfobacula toluolica Tol2, Desulfobacula toluolica str. Tol2, Desulfobacula toluolica strain Tol2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.