STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCK80485.1Polysaccharide deacetylase. (265 aa)    
Predicted Functional Partners:
CCK80488.1
Glycosyl transferase, family II.
 
  
 0.900
asnB
AsnB: asparagine synthetase.
 
  
 0.829
CCK80475.1
Predicted polysaccharide deacetylase.
 
     0.794
CCK80489.1
Glycosyl transferase, family I.
  
 0.742
fmt-2
Fmt: predicted methionyl-tRNA formyltranserase.
  
  
 0.719
CCK80484.1
Conserved uncharacterized protein.
       0.659
CCK78978.1
Glycosyl transferase, family 2.
  
  
 0.616
CCK80299.1
Glycosyl transferase, family 2.
  
  
 0.573
CCK80492.1
Polysaccharide deacetylase.
 
     0.527
CCK80302.1
Predicted glycosyl transferase, family 2.
 
  
 0.525
Your Current Organism:
Desulfobacula toluolica
NCBI taxonomy Id: 651182
Other names: D. toluolica Tol2, Desulfobacula toluolica DSM 7467, Desulfobacula toluolica Tol2, Desulfobacula toluolica str. Tol2, Desulfobacula toluolica strain Tol2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.