Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CCK80489.1Glycosyl transferase, family I. (381 aa)    
Predicted Functional Partners:
CCK80488.1
Glycosyl transferase, family II.
   
 0.865
CCK80477.1
Glycosyl transferase, family I.
    
0.860
fmt-2
Fmt: predicted methionyl-tRNA formyltranserase.
    
 0.845
CCK80485.1
Polysaccharide deacetylase.
  
 0.743
CCK80492.1
Polysaccharide deacetylase.
  
 0.726
asnB
AsnB: asparagine synthetase.
 
  
 0.716
epsB
EpsB: sugar transferase, PEPCTERM system associated.
 
  
 0.707
rfaF
RfaF: ADP-heptose--LPS heptosyltransferase II.
 
  
 0.703
CCK79412.1
Predicted lipopolysaccharide heptosyltransferase II.
 
  
 0.679
CCK80493.1
UDP-glucose dehydrogenase domain protein.
 
  
 0.640
Your Current Organism:
Desulfobacula toluolica
NCBI taxonomy Id: 651182
Other names: D. toluolica Tol2, Desulfobacula toluolica DSM 7467, Desulfobacula toluolica Tol2, Desulfobacula toluolica str. Tol2, Desulfobacula toluolica strain Tol2
Server load: low (40%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.