STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCK80521.1Isochorismatase hydrolase. (179 aa)    
Predicted Functional Partners:
CCK81829.1
Amino acid adenylation domain protein.
  
  
 0.998
pfaA
PfaA: polyketide-type polyunsaturated fatty acid synthase.
  
  
 0.680
CCK80289.1
PaaI-related protein.
  
 
 0.541
qhpB
QhpB: putative quinohemoprotein amine dehydrogenase, beta subunit; Signal peptide.
  
    0.540
CCK79046.1
Phosphoesterase family protein; Signal peptide.
  
    0.540
CCK81789.1
Predicted polyketide synthase.
  
  
 0.522
CCK82113.1
TonB-dependent receptor; Signal peptide.
  
  
 0.455
CCK80522.1
Conserved uncharacterized protein, DUF1078, related to flagellar hook protein.
       0.450
CCK78210.1
Flavodoxin family protein.
   
  
 0.448
CCK81463.1
Flavodoxin.
   
  
 0.448
Your Current Organism:
Desulfobacula toluolica
NCBI taxonomy Id: 651182
Other names: D. toluolica Tol2, Desulfobacula toluolica DSM 7467, Desulfobacula toluolica Tol2, Desulfobacula toluolica str. Tol2, Desulfobacula toluolica strain Tol2
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