Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CCK80558.1Sel1 repeat domain protein; Signal peptide. (452 aa)    
Predicted Functional Partners:
flgC
FlgC: flagellar basal-body rod protein; Belongs to the flagella basal body rod proteins family.
   
 
 0.763
CCK82477.1
Predicted AAA ATPase chaperone; Belongs to the AAA ATPase family.
   
 0.594
CCK78256.1
Uncharacterized protein related to peptidase C14.
  
 0.566
CCK78498.1
Conserved uncharacterized protein.
    
 0.505
CCK79416.1
Uncharacterized protein, kinase-like domain.
    
 0.505
CCK80692.1
WD-40 repeat domain protein.
 
 
 
 0.490
flgB
FlgB: flagellar basal-body rod protein; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body.
    
 
 0.490
CCK80691.1
WD-40 repeat domain protein.
 
 
 
 0.482
tyrS
TyrS: tyrosyl-tRNA synthetase; Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two- step reaction: tyrosine is first activated by ATP to form Tyr-AMP and then transferred to the acceptor end of tRNA(Tyr); Belongs to the class-I aminoacyl-tRNA synthetase family. TyrS type 1 subfamily.
  
 
   0.478
CCK80559.1
Transposase, IS66 family.
       0.477
Your Current Organism:
Desulfobacula toluolica
NCBI taxonomy Id: 651182
Other names: D. toluolica Tol2, Desulfobacula toluolica DSM 7467, Desulfobacula toluolica Tol2, Desulfobacula toluolica str. Tol2, Desulfobacula toluolica strain Tol2
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