Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CCK80577.1Extracellular ligand-binding receptor. (566 aa)    
Predicted Functional Partners:
livM3
LivM3: high-affinity branched-chain amino acid transport system, permease protein; Signal peptide; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.878
livH3
LivH3: high-affinity branched-chain amino acid transport system, permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.864
livG3
LivG3: high-affinity branched-chain amino acid transport system, ATP-binding protein.
 
  
 0.819
livH
LivH: high-affinity branched-chain amino acid transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.782
livH2
LivH2: branched-chain amino acid ABC transport system permease protein; Signal anchor; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.780
livM2
LivM2: branched-chain amino acid ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.772
livF3
LivF3: high-affinity branched-chain amino acid transport system, ATP-binding protein.
 
  
 0.772
livG
LivG: High-affinity branched-chain amino acid transport ATP-binding protein.
 
  
 0.757
livF
LivF: High-affinity branched-chain amino acid transport ATP-binding protein.
 
  
 0.735
livM
LivM: high-affinity branched-chain amino acid transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.716
Your Current Organism:
Desulfobacula toluolica
NCBI taxonomy Id: 651182
Other names: D. toluolica Tol2, Desulfobacula toluolica DSM 7467, Desulfobacula toluolica Tol2, Desulfobacula toluolica str. Tol2, Desulfobacula toluolica strain Tol2
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