Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
asrB1AsrB1: predicted anaerobic sulfite reductase, subunit B. (281 aa)    
Predicted Functional Partners:
asrA1
AsrA1: predicted anaerobic sulfite reductase, subunit A.
   
 0.989
asrA2
AsrA2: predicted anaerobic sulfite reductase, subunit A.
 
   0.958
CCK80581.1
Predicted coenzyme F420 hydrogenase/dehydrogenase, beta subunit.
 
   0.955
pyrD
PyrD: dihydroorotate dehydrogenase; Catalyzes the conversion of dihydroorotate to orotate.
 
 
 0.948
CCK81038.1
4Fe-4S ferredoxin iron-sulfur binding domain protein.
 
   
 0.821
mvhD5
MvhD5: methyl-viologen-reducing hydrogenase, delta subunit.
 
 
 0.817
pyrF
PyrF: orotidine 5'-phosphate decarboxylase; Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP); Belongs to the OMP decarboxylase family. Type 1 subfamily.
  
  
 0.760
pyrB
PyrB: aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.
  
  
 0.759
carA
CarA: carbamoyl-phosphate synthase, small chain; Belongs to the CarA family.
  
  
 0.735
hdlA6
HdlA6: heterodisulfide reductase-like protein, iron-sulfur subunit.
 
  
 0.705
Your Current Organism:
Desulfobacula toluolica
NCBI taxonomy Id: 651182
Other names: D. toluolica Tol2, Desulfobacula toluolica DSM 7467, Desulfobacula toluolica Tol2, Desulfobacula toluolica str. Tol2, Desulfobacula toluolica strain Tol2
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