Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CCK80596.1Predicted methyl-accepting chemotyis protein. (641 aa)    
Predicted Functional Partners:
CCK80597.1
Chemotaxis protein MotB-related protein; Signal anchor.
 
 
 0.986
CCK80599.1
Putative helicase.
 
 
 0.969
CCK80598.1
Conserved uncharacterized protein.
       0.808
CCK78767.1
Putative histone deacetylase family protein.
   
 0.788
CCK81458.1
Conserved uncharacterized protein; Signal peptide.
  
     0.767
alaS
AlaS: alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.
   
 0.759
CCK79001.1
Metallo-beta-lactamase family protein (Rnase).
    
 0.753
rbgA
RbgA: ribosome biogenesis GTPase; Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily.
   
 0.740
rpmD
RpmD: 50S ribosomal protein L30.
   
  0.722
motB
MotB: chemotaxis motility protein B.
  
 
 0.719
Your Current Organism:
Desulfobacula toluolica
NCBI taxonomy Id: 651182
Other names: D. toluolica Tol2, Desulfobacula toluolica DSM 7467, Desulfobacula toluolica Tol2, Desulfobacula toluolica str. Tol2, Desulfobacula toluolica strain Tol2
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