Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
yaeT2YaeT2: outer membrane protein assembly complex protein. (785 aa)    
Predicted Functional Partners:
CCK80708.1
Conserved uncharacterized protein, DUF490.
 
   
 0.893
bamD
Putative DNA uptake lipoprotein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.
 
 
 0.890
CCK81534.1
Membrane protein, predicted to be involved in aromatic hydrocarbon degradation; Signal peptide.
 
 
 
 0.828
surA
SurA: predicted chaperone (peptidyl-prolyl cis-trans isomerase); Signal peptide.
  
 
 0.819
CCK80424.1
Conserved uncharacterized protein; Signal peptide.
  
 
 
 0.805
CCK78371.1
Uncharacterized protein related to outer membrane protein MIP.
   
 
 0.764
mip
Peptidyl-prolyl cis-trans isomerase; Mip: outer membrane protein MIP (macrophage infectivity potentiator) (peptidyl-proly cis-trans isomerase, FKBP-type).
   
 
 0.764
lpxD
LpxD: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3- hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. Belongs to the transferase hexapeptide repeat family. LpxD subfamily.
 
  
 0.755
rseP
RseP: predicted membrane-associated zinc metallprotease; Signal peptide.
  
  
 0.745
skp
Skp: predicted outer membrane chaperone; Signal peptide.
 
  
 0.725
Your Current Organism:
Desulfobacula toluolica
NCBI taxonomy Id: 651182
Other names: D. toluolica Tol2, Desulfobacula toluolica DSM 7467, Desulfobacula toluolica Tol2, Desulfobacula toluolica str. Tol2, Desulfobacula toluolica strain Tol2
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