Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CCK78371.1 | CCK80727.1 | TOL2_C02010 | TOL2_C25680 | Uncharacterized protein related to outer membrane protein MIP. | Uncharacterized protein. | 0.585 |
CCK80727.1 | CCK78371.1 | TOL2_C25680 | TOL2_C02010 | Uncharacterized protein. | Uncharacterized protein related to outer membrane protein MIP. | 0.585 |
CCK80727.1 | CCK81789.1 | TOL2_C25680 | TOL2_C36320 | Uncharacterized protein. | Predicted polyketide synthase. | 0.580 |
CCK80727.1 | asd | TOL2_C25680 | TOL2_C28490 | Uncharacterized protein. | Asd: aspartate-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family. | 0.768 |
CCK80727.1 | hisHF | TOL2_C25680 | TOL2_C40970 | Uncharacterized protein. | HisHF: imidazole glycerol phosphate synthase; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the synthesis of IGP and AICAR. The resulting ammonia molecule is channeled to the active site of HisF; Belongs to the HisA/HisF family. | 0.630 |
CCK80727.1 | hom | TOL2_C25680 | TOL2_C25020 | Uncharacterized protein. | Hom: homoserine dehydrogenase. | 0.706 |
CCK80727.1 | metS | TOL2_C25680 | TOL2_C13250 | Uncharacterized protein. | MetG: methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation. | 0.579 |
CCK80727.1 | mip | TOL2_C25680 | TOL2_C10370 | Uncharacterized protein. | Peptidyl-prolyl cis-trans isomerase; Mip: outer membrane protein MIP (macrophage infectivity potentiator) (peptidyl-proly cis-trans isomerase, FKBP-type). | 0.585 |
CCK80727.1 | pabB | TOL2_C25680 | TOL2_C33640 | Uncharacterized protein. | PabB: p-aminobenzoate synthase, subunit I. | 0.601 |
CCK80727.1 | pfaA | TOL2_C25680 | TOL2_C34430 | Uncharacterized protein. | PfaA: polyketide-type polyunsaturated fatty acid synthase. | 0.632 |
CCK80727.1 | thrC | TOL2_C25680 | TOL2_C05910 | Uncharacterized protein. | ThrC: threonine synthase. | 0.755 |
CCK81789.1 | CCK80727.1 | TOL2_C36320 | TOL2_C25680 | Predicted polyketide synthase. | Uncharacterized protein. | 0.580 |
CCK81789.1 | hisHF | TOL2_C36320 | TOL2_C40970 | Predicted polyketide synthase. | HisHF: imidazole glycerol phosphate synthase; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the synthesis of IGP and AICAR. The resulting ammonia molecule is channeled to the active site of HisF; Belongs to the HisA/HisF family. | 0.531 |
CCK81789.1 | metS | TOL2_C36320 | TOL2_C13250 | Predicted polyketide synthase. | MetG: methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation. | 0.581 |
CCK81789.1 | pabB | TOL2_C36320 | TOL2_C33640 | Predicted polyketide synthase. | PabB: p-aminobenzoate synthase, subunit I. | 0.808 |
CCK81789.1 | pfaA | TOL2_C36320 | TOL2_C34430 | Predicted polyketide synthase. | PfaA: polyketide-type polyunsaturated fatty acid synthase. | 0.999 |
asd | CCK80727.1 | TOL2_C28490 | TOL2_C25680 | Asd: aspartate-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family. | Uncharacterized protein. | 0.768 |
asd | hisHF | TOL2_C28490 | TOL2_C40970 | Asd: aspartate-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family. | HisHF: imidazole glycerol phosphate synthase; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the synthesis of IGP and AICAR. The resulting ammonia molecule is channeled to the active site of HisF; Belongs to the HisA/HisF family. | 0.520 |
asd | hom | TOL2_C28490 | TOL2_C25020 | Asd: aspartate-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family. | Hom: homoserine dehydrogenase. | 0.981 |
asd | metS | TOL2_C28490 | TOL2_C13250 | Asd: aspartate-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family. | MetG: methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation. | 0.581 |
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