STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCK80748.1Integrase/recombinase, XerC/CodV family; Belongs to the 'phage' integrase family. (295 aa)    
Predicted Functional Partners:
xerD
XerD: tyrosine recombinase, subunit D; Belongs to the 'phage' integrase family.
 
    
0.841
xerC3
XerC3: tyrosine recombinase, subunit C; Belongs to the 'phage' integrase family.
 
    
0.835
CCK78373.1
Putative tyrosine recombinase (Fragment).
  
     0.775
CCK80741.1
Integrase, integron-type; Belongs to the 'phage' integrase family.
  
     0.753
CCK80034.1
Integrase family protein; Belongs to the 'phage' integrase family.
  
   
 0.734
CCK80173.1
Integrase/recombinase (E2 protein); Belongs to the 'phage' integrase family.
  
     0.727
CCK79427.1
Putative integrase.
  
     0.687
CCK80962.1
Putative integrase.
  
     0.579
CCK82404.1
Integrase; Belongs to the 'phage' integrase family.
  
   
 0.481
ftsK-2
FtsK: DNA translocase; Belongs to the FtsK/SpoIIIE/SftA family.
 
   
 0.465
Your Current Organism:
Desulfobacula toluolica
NCBI taxonomy Id: 651182
Other names: D. toluolica Tol2, Desulfobacula toluolica DSM 7467, Desulfobacula toluolica Tol2, Desulfobacula toluolica str. Tol2, Desulfobacula toluolica strain Tol2
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