STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCK80772.1Transposase. (351 aa)    
Predicted Functional Partners:
CCK80771.1
Conserved uncharacterized protein.
 
     0.947
CCK78780.1
Putative transposase, IS3 family.
 
     0.777
CCK79589.1
Putative transposase.
 
     0.777
YPO1874
Conserved uncharacterized protein.
 
     0.777
CCK80809.1
Conserved uncharacterized protein.
 
     0.777
CCK79787.1
Conserved uncharacterized protein.
 
     0.766
CCK80773.1
Conserved uncharacterized protein.
       0.436
CCK80774.1
Conserved uncharacterized protein, DUF1768.
       0.436
CCK80770.1
Conserved uncharacterized protein, DUF955.
       0.420
CCK80768.1
Conserved uncharacterized protein.
       0.412
Your Current Organism:
Desulfobacula toluolica
NCBI taxonomy Id: 651182
Other names: D. toluolica Tol2, Desulfobacula toluolica DSM 7467, Desulfobacula toluolica Tol2, Desulfobacula toluolica str. Tol2, Desulfobacula toluolica strain Tol2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.