Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
CCK80774.1Conserved uncharacterized protein, DUF1768. (195 aa)    
Predicted Functional Partners:
CCK78187.1
Putative type-1 restriction enzyme EcoKI specificity protein.
     0.851
CCK82477.1
Predicted AAA ATPase chaperone; Belongs to the AAA ATPase family.
   
 
 0.834
CCK80773.1
Conserved uncharacterized protein.
       0.797
mnmA
MnmA: tRNA-specific 2-thiouridylase; Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34.
  
     0.494
thiF
ThiF: thiamine biosynthesis protein.
   
 0.446
moeB
MoeB: molybdopterin biosynthesis protein.
   
 0.446
CCK79240.1
Conserved uncharacterized protein.
   
 0.446
CCK79743.1
ThiF/MoeB family protein.
   
 0.446
moeB2
MoeB2: molybdopterin biosynthesis protein.
   
 0.446
CCK80771.1
Conserved uncharacterized protein.
       0.436
Your Current Organism:
Desulfobacula toluolica
NCBI taxonomy Id: 651182
Other names: D. toluolica Tol2, Desulfobacula toluolica DSM 7467, Desulfobacula toluolica Tol2, Desulfobacula toluolica str. Tol2, Desulfobacula toluolica strain Tol2
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