Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
CCK80790.1Integrase, catalytic region. (480 aa)    
Predicted Functional Partners:
istB5
IstB5: IstB-like ATP-binding protein, transposase IS21 family.
 
     0.928
istB4-2
Predicted transposase, IS21 family; Belongs to the DnaA family.
 
     0.699
istB2
IstB2: IstB-like ATP-binding protein, transposase IS21 family.
 
     0.699
istB4
IstB4: IstB-like ATP-binding protein, transposase IS21 family.
 
     0.699
CCK80525.1
Transposase, IS21 family.
 
     0.699
istB6
IstB6: IstB-like ATP-binding protein, transposase IS21 family.
 
     0.699
dnaB
DnaB: replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins. Belongs to the helicase family. DnaB subfamily.
  
 
 0.601
CCK80791.1
Uncharacterized protein.
       0.501
CCK79593.1
Conserved uncharacterized protein.
  
     0.485
CCK79435.1
Uncharacterized protein.
  
     0.449
Your Current Organism:
Desulfobacula toluolica
NCBI taxonomy Id: 651182
Other names: D. toluolica Tol2, Desulfobacula toluolica DSM 7467, Desulfobacula toluolica Tol2, Desulfobacula toluolica str. Tol2, Desulfobacula toluolica strain Tol2
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