STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCK80829.1Flavin containing amine oxidase. (371 aa)    
Predicted Functional Partners:
CCK78767.1
Putative histone deacetylase family protein.
   
 0.938
CCK79675.1
Pyridoxal-dependent decarboxylase family protein.
    
 0.917
CCK80077.1
Predicted acetyltransferase, GNAT family.
    
 0.905
adh2
Adh2: iron-containing alcohol dehydrogenase.
     
 0.901
adh3
Adh3: iron-containing alcohol dehydrogenase.
     
 0.901
CCK80409.1
Predicted ATP-dependent RNA helicase.
    
 0.726
CCK80599.1
Putative helicase.
    
 0.726
rapA
RapA: RNA polymerase-associated protein A.
    
 0.726
CCK81896.1
Predicted uncharacterized ATP-dependent helicase.
    
 0.726
dnaN
DnaN: DNA polymerase III, beta chain; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiatio [...]
  
    0.645
Your Current Organism:
Desulfobacula toluolica
NCBI taxonomy Id: 651182
Other names: D. toluolica Tol2, Desulfobacula toluolica DSM 7467, Desulfobacula toluolica Tol2, Desulfobacula toluolica str. Tol2, Desulfobacula toluolica strain Tol2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.