Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
CCK80838.1Predicted transposase, IS4 family. (339 aa)    
Predicted Functional Partners:
CCK80837.1
Transposase, IS4 family.
 
     0.855
CCK79837.1
Conserved uncharacterized protein.
  
     0.706
CCK80839.1
Tetratricopeptide repeat domain protein.
       0.705
CCK79836.1
Conserved uncharacterized protein.
  
     0.644
CCK79841.1
Uncharacterized protein.
  
     0.626
CCK80593.1
Conserved uncharacterized protein, DUF86.
  
     0.562
CCK80836.1
Uncharacterized protein.
      0.558
CCK79838.1
Predicted uncharacterized ATP-dependent helicase.
  
     0.501
CCK78265.1
Transposase, IS4 family protein.
  
     0.491
CCK80409.1
Predicted ATP-dependent RNA helicase.
  
     0.486
Your Current Organism:
Desulfobacula toluolica
NCBI taxonomy Id: 651182
Other names: D. toluolica Tol2, Desulfobacula toluolica DSM 7467, Desulfobacula toluolica Tol2, Desulfobacula toluolica str. Tol2, Desulfobacula toluolica strain Tol2
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