STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCK80924.1TRAP transporter, solute receptor, TAXI family; Signal peptide. (338 aa)    
Predicted Functional Partners:
CCK80923.1
TRAP transporter, 4TM/12TM fusion protein.
 
    0.901
CCK80847.1
TRAP transporter, 4TM/12TM fusion protein.
 
    0.836
CCK80866.1
TRAP transporter, 4TM/12TM fusion protein.
 
    0.836
CCK80883.1
TRAP transporter, 4TM/12TM fusion protein.
 
    0.836
CCK80904.1
TRAP transporter, 4TM/12TM fusion protein.
 
    0.836
CCK82024.1
TRAP transporter, 4TM/12TM fusion protein.
 
    0.836
lcfB5
LcfB5: long-chain-fatty-acid--CoA ligase.
       0.584
ubiD5
UbiD5: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase.
       0.437
CCK80922.1
Phosphatidylethanolamine-binding protein.
  
    0.411
Your Current Organism:
Desulfobacula toluolica
NCBI taxonomy Id: 651182
Other names: D. toluolica Tol2, Desulfobacula toluolica DSM 7467, Desulfobacula toluolica Tol2, Desulfobacula toluolica str. Tol2, Desulfobacula toluolica strain Tol2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.