Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
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[Homology]
Score
lcfB5LcfB5: long-chain-fatty-acid--CoA ligase. (522 aa)    
Predicted Functional Partners:
CCK81789.1
Predicted polyketide synthase.
  
 0.936
pfaA
PfaA: polyketide-type polyunsaturated fatty acid synthase.
  
 0.934
CCK81829.1
Amino acid adenylation domain protein.
 
 
0.836
CCK80924.1
TRAP transporter, solute receptor, TAXI family; Signal peptide.
       0.584
ubiD5
UbiD5: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase.
       0.565
CCK80650.1
Putative multi-domain beta-ketoacyl polyketide synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
  
 0.526
rplF
RplF: 50S ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family.
    
  0.501
sodB
SodB: superoxid dismutase, iron-type.
  
 
 0.459
bamH1
BamH1: NADH-quinone oxidoreductase, subunit F.
   
 
 0.445
bamH3
BamH3: NADH-quinone oxidoreductase, subunit F.
   
 
 0.445
Your Current Organism:
Desulfobacula toluolica
NCBI taxonomy Id: 651182
Other names: D. toluolica Tol2, Desulfobacula toluolica DSM 7467, Desulfobacula toluolica Tol2, Desulfobacula toluolica str. Tol2, Desulfobacula toluolica strain Tol2
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